BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008G11SP1|AL425931
(789 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1022 1475 0.0
>3x_Contig1022
Length = 4856
Score = 1475 bits (743), Expect = 0.0
Identities = 781/788 (99%), Gaps = 5/788 (0%)
Strand = Plus / Plus
Query: 1 agtantttttcttatctttggtgttaatgatacgtggtagcacctggtaatatcatcatc 60
|||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 3588 agtattttttcttatctttggtgttaa-gatacgtggtagcacctggtaa-atcatcatc 3645
Query: 61 ggccaactcattggacgacgtaattctgtttaattaattcataggcttgtttcttcccct 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3646 ggccaac-cattggacgacgtaattctgtttaattaattcataggcttgtttcttcccct 3704
Query: 121 caccgttagttttcctatcacataatcgcacacaatcctcgtctttaccgaacgtcagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3705 caccgttagttttcctatcacataatcgcacacaatcctcgtctttaccgaacgtcagct 3764
Query: 181 gatagtccgattgccatttcttgttccctgtataatatgtcactgaaagtcaagggtaaa 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 3765 gatagtccgattgccatttcttgttccc-gtataatatgtcactgaaagtcaagggtaaa 3823
Query: 241 ggtttcatgtcctgcgacggtggacaagtgaaatgtaagtcgtaatatccatacgagaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3824 ggtttcatgtcctgcgacggtggacaagtgaaatgtaagtcgtaatatccatacgagaaa 3883
Query: 301 tgagttaagtcagattcgactttgttcacagtgatatcgaccttatcaccatactcatag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3884 tgagttaagtcagattcgactttgttcacagtgatatcgaccttatcaccatactcatag 3943
Query: 361 aagttcggactcaatagtccgtactctttgaaaactccagtgtgctgctggtacgacgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3944 aagttcggactcaatagtccgtactctttgaaaactccagtgtgctgctggtacgacgaa 4003
Query: 421 gaaaatttgaatgggttggcatctggggaaggccgacgatgatttctcagccttggaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4004 gaaaatttgaatgggttggcatctggggaaggccgacgatgatttctcagccttggaaga 4063
Query: 481 acccatattagacttaaaagtaccagtaaactgactagaaccgatcttgatttcagtttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4064 acccatattagacttaaaagtaccagtaaactgactagaaccgatcttgatttcagtttc 4123
Query: 541 ataacaagagtttagtggtggctgcgtgtgttaatggtttatgaacataaagcgaaagac 600
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4124 ataacaagagtttagtggtggctgcgtgtgttaatggtttatgaac-taaagcgaaagac 4182
Query: 601 agamataaatgaggaacagtatgaataattgtgttaaggaaatataatagtttaatgtca 660
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4183 agaaataaatgaggaacagtatgaataattgtgttaaggaaatataatagtttaatgtca 4242
Query: 661 cacacaaacacggagggcggataccagtgttcttcgatcaaaagaaaaaaaccccaggaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4243 cacacaaacacggagggcggataccagtgttcttcgatcaaaagaaaaaaaccccaggaa 4302
Query: 721 aattattaaccaaaaccaaaacaaaaccaaaaccaggacagtagtataatacagatatat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4303 aattattaaccaaaaccaaaacaaaaccaaaaccaggacagtagtataatacagatatat 4362
Query: 781 atatatat 788
||||||||
Sbjct: 4363 atatatat 4370
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9511
Number of Sequences: 1807
Number of extensions: 9511
Number of successful extensions: 142
Number of sequences better than 1.0e-20: 1
length of query: 789
length of database: 10,358,551
effective HSP length: 16
effective length of query: 773
effective length of database: 10,329,639
effective search space: 7984810947
effective search space used: 7984810947
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)